Mapping gene coordinates to transcript exons
Hi all, I currently have file A, which contains 250 target genes and their positions (ch3:178916681-chr3:178916741). I have another file with the list of RefSeq transcript IDs used for these target genes. How can I go about getting the exon positions of these target genes?
• 979 views
•
link
updated
by
Hamid Ghaedi
•
written
by
Volka
•
written
by
Volka
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
How to Obtain Gene-Transcript Isoforms from RefSeq Format using a gff files as input?
written by mauricio.1313 •
-
Is there a way to do GO terms enrichment analysis and keep track of gene symbols?
written by DN99 •
-
How to capture the position of SNPs from the gene's locations
written by Kumar
-
How do I use vcftools to filter by variant ID OR variant position?
written by jwhite007 •
-
How to get Go Terms IDs from given a file that contains gene Ensembl IDs with a python script
written by jopealfe •
-
Finding S. cerevisiae mRNA of specific genes from SGD db.
written by elisheva
-
Transcript IDs from VEP Annotation
written by seq_ngs •
-
refseq NC id list download
written by kapil.joshi036
-
From RefSeq to Go Terms
written by aaredav •
-
GO terms annotation file format to use in PANTHER
written by ishengomae
both
biomaRtand UCSC Table browser can help you with that