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Comment: Comment: How do I view the height / distribution of ChIP-seq peaks?
updated 2.1 years ago by 43k • written 9.3 years ago by 6.0k
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Comment: C: Where are the different RAM versions of IGB in v8.3.0
9.3 years ago by Ian 6.0k
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2.9k
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Comment: Comment: Where are the different RAM versions of IGB in v8.3.0
updated 2.1 years ago by 43k • written 9.3 years ago by 6.0k
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35k
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Comment: Comment: Remove mitochondrial reads from BAM files
updated 2.1 years ago by 43k • written 9.3 years ago by 6.0k
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3.5k
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Comment: Comment: Using MEME-chip for motif discovery in sequences not derived from Chip-seq?
updated 2.1 years ago by 43k • written 9.3 years ago by 6.0k
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1
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3.1k
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Comment: Comment: Computational requirement to host a genome browser
updated 2.1 years ago by 43k • written 9.3 years ago by 6.0k
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1
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3.4k
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Comment: Comment: How can I create a more accurate PWM?
updated 2.2 years ago by 43k • written 9.4 years ago by 6.0k
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8.8k
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Comment: Comment: Regular expression matching with Python and biopython SeqIO
updated 3.1 years ago by 43k • written 9.5 years ago by 6.0k
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11k
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Comment: Comment: Comparing two ChIP-seq libraries
updated 2.3 years ago by 43k • written 9.5 years ago by 6.0k
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9.1k
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Comment: C: Association between bed files - statistical significance
9.5 years ago by Ian 6.0k
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1
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11k
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Comment: Comment: Comparing two ChIP-seq libraries
updated 2.3 years ago by 43k • written 9.5 years ago by 6.0k
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1
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9.1k
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Comment: C: Association between bed files - statistical significance
9.5 years ago by Ian 6.0k
1
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7.8k
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Comment: Comment: virtualenv - running Python based software in isolation
updated 2.4 years ago by 43k • written 9.8 years ago by 6.0k
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63k
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Comment: C: Convert SAM to BAM
9.8 years ago by Ian 6.0k
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3.2k
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Comment: Comment: weird SAM flag explanation
updated 2.4 years ago by 43k • written 9.8 years ago by 6.0k
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6.4k
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Comment: Comment: Convert paired end bam file into bed of fragments
updated 2.5 years ago by 43k • written 9.8 years ago by 6.0k
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27k
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Comment: C: How To Do Normalization Of Two Chip-Seq Data?
9.8 years ago by Ian 6.0k
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24k
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Comment: C: How To Extract Reads-Pairs Aligned Concordantly Exactly 1 Time?
10.1 years ago by Ian 6.0k
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14k
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Comment: C: Sam To Bam - Loss Of Data Or Just Great Compression?
10.3 years ago by Ian 6.0k
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13k
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Comment: C: Why Does The Base Quality Drop Towards The End For Illumina Reads ?
10.3 years ago by Ian 6.0k
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5.1k
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Comment: C: Macs Peaks Caveat ?
10.6 years ago by Ian 6.0k
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4.4k
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Comment: C: Is It Okay To Remove Chrun And Chr*_Random Reads From A Bed File?
10.6 years ago by Ian 6.0k
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3.1k
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Comment: C: Tool For Binning Windowbed Output For K-Means Clustering
10.7 years ago by Ian 6.0k
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4.2k
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Comment: C: K-Means Clustering
10.7 years ago by Ian 6.0k
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2.7k
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Comment: C: Bamchop: Efficient Digest Of High-Throughput Sequencing Data In A Reproducible R
10.7 years ago by Ian 6.0k
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8.9k
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Comment: C: Generate Random Genomic Regions
10.8 years ago by Ian 6.0k
1
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0
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4.1k
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Comment: C: Illumina'S New Reduced Resolution Q (Phred) Scores - Good Or Bad?
10.8 years ago by Ian 6.0k
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0
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33k
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Comment: C: Fastq Quality Control Shootout
10.9 years ago by Ian 6.0k
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1
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2.4k
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Comment: C: Motif And Down Stream Analysis
10.9 years ago by Ian 6.0k
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1
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2.4k
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Comment: C: Motif And Down Stream Analysis
10.9 years ago by Ian 6.0k
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6.8k
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Comment: C: Sam Tools Pileup Format
10.9 years ago by Ian 6.0k
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0
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25k
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Comment: C: How Can I Generate A Venn Diagram In R For A Given Csv File
11.0 years ago by Ian 6.0k
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0
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8.0k
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Comment: C: Chip-Seq Peak Calling Using Macs In Galaxy- Overlapping Peaks For Replicates
11.1 years ago by Ian 6.0k
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1
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9.3k
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Comment: C: Annotate Chip-Peaks With Gene Symbol/Name
11.1 years ago by Ian 6.0k
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2.9k
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Comment: C: Is It Possible To Manually Reorder Steps In A Galaxy Workflow Summary?
11.2 years ago by Ian 6.0k
1
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0
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7.3k
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Comment: C: Get A Graphical Representation Of Number Of Reads In Bam File For A Certain Geno
11.2 years ago by Ian 6.0k
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2
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4.8k
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Comment: C: How To Match Genes That Were Labeled Via Different Naming/Identification Standar
11.2 years ago by Ian 6.0k
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0
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7.3k
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Comment: C: P Value Or Statistical Significance Of Real Peak Compared To Random Peak Overlap
11.2 years ago by Ian 6.0k
4
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0
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146k
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Comment: C: Converting Genome Coordinates From One Genome Version To Another (Ucsc Liftover,
11.2 years ago by Ian 6.0k
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0
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7.3k
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Comment: C: P Value Or Statistical Significance Of Real Peak Compared To Random Peak Overlap
11.2 years ago by Ian 6.0k
0
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2
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12k
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Comment: C: How To Plot Read Coverage Over Many Different Genomic Regions?
11.3 years ago by Ian 6.0k
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0
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13k
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Comment: C: How To Extract Scores From Bedgraph File Using Bed Tools
11.3 years ago by Ian 6.0k
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4.6k
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Comment: C: How To Calculate Over-Representation Of Tfbs Of Single Tf Per Gene
11.4 years ago by Ian 6.0k
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1
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3.5k
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Comment: C: Dna Motif Discovery
11.5 years ago by Ian 6.0k
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2
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4.1k
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Comment: C: Random Genomic Regions Of A Given Length Distribution
11.5 years ago by Ian 6.0k
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0
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5.1k
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Comment: C: Macs Peaks Caveat ?
11.5 years ago by Ian 6.0k
0
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1
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9.1k
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Comment: C: Effective Genome Size Of Mm10 For Macs14
11.5 years ago by Ian 6.0k
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0
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65k
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Comment: C: How To Convert Gencode Gtf Into Bed Format ?
11.5 years ago by Ian 6.0k
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1
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9.2k
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Comment: C: Ion Torrent Mapping
12.1 years ago by Ian 6.0k
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0
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2.1k
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Comment: C: Gene Symbol To Gene Type
12.1 years ago by Ian 6.0k
166 results • Page 2 of 4
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