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How to convert kegg orthology to higher classification?
annotations rnaseq
2.7 years ago by N15 ▴ 160
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598
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Answer: Answer: How to convert kegg orthology to higher classification?
2.7 years ago by N15 ▴ 160
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2
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2.2k
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Answer: Answer: Snakemake bwa mem
2.7 years ago by N15 ▴ 160
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1
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1.4k
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Comment: Comment: Can it be useful to depict variable genes using non-log transformed counts?
2.7 years ago by N15 ▴ 160
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1.4k
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Comment: Comment: Can it be useful to depict variable genes using non-log transformed counts?
2.8 years ago by N15 ▴ 160
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1
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1.3k
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Comment: Comment: How do you split metagenomic bins/MAGs into eukaryotic and prokaryotic?
2.8 years ago by N15 ▴ 160
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1
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1.4k
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Comment: Comment: Can it be useful to depict variable genes using non-log transformed counts?
2.8 years ago by N15 ▴ 160
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6
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1.4k
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Can it be useful to depict variable genes using non-log transformed counts?
variance rnaseq heatmap
updated 2.6 years ago by 82k • written 2.8 years ago by ▴ 160
1
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1
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5.3k
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Comment: Comment: Mean Variance Relationship single cell RNA-Seq Data
3.0 years ago by N15 ▴ 160
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1.2k
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Answer: A: How can a single peptide produce redundant fragments during mass spec proteomics
3.3 years ago by N15 ▴ 160
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1
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1.2k
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How can a single peptide produce redundant fragments during mass spec proteomics?
proteomics mass spectrometry
3.3 years ago by N15 ▴ 160
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1.5k
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Comment: C: How to combine different data types and perform PCA in R
4.0 years ago by N15 ▴ 160
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0
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871
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Comment: C: Which bioinformatic tool can I use to assess overlapping genes between 2 dataset
4.0 years ago by N15 ▴ 160
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3.7k
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Comment: C: BLAST Command Not Found Under Parent Directory
4.0 years ago by N15 ▴ 160
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0
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589
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Answer: A: Mapping an unique KEGG pathway
4.0 years ago by N15 ▴ 160
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1.4k
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Comment: C: gene expression comparison between tpm and fpkm
4.0 years ago by N15 ▴ 160
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0
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2.6k
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Answer: A: Heatmap of Distance Clusters
4.0 years ago by N15 ▴ 160
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2
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882
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Answer: A: Custome database creation from RNAseq dataset for proteomics database search hel
4.0 years ago by N15 ▴ 160
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1
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1.3k
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Comment: C: using heat map to measure gene expression at different developmental stages
4.0 years ago by N15 ▴ 160
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1.0k
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Comment: C: How to rarefying 18s rDNA data?
4.0 years ago by N15 ▴ 160
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1
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1.0k
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Comment: C: How to rarefying 18s rDNA data?
4.0 years ago by N15 ▴ 160
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0
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628
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Comment: C: Sequence Alignment editor suggestion
4.0 years ago by N15 ▴ 160
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0
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2.9k
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Comment: C: HISAT2 or SALMON AND KALLISTO
4.0 years ago by N15 ▴ 160
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0
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964
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Answer: A: WGS phylogenetic analysis
4.0 years ago by N15 ▴ 160
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2
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1.3k
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Comment: C: using heat map to measure gene expression at different developmental stages
4.0 years ago by N15 ▴ 160
1
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1
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1.3k
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Comment: C: using heat map to measure gene expression at different developmental stages
4.0 years ago by N15 ▴ 160
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0
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1.3k
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Comment: C: using heat map to measure gene expression at different developmental stages
4.0 years ago by N15 ▴ 160
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0
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1.9k
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Comment: C: How to detect and remove bacterial sequences in assembled eukaryote genome
4.0 years ago by N15 ▴ 160
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1
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3.3k
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Comment: C: [E::bwa_idx_load_from_disk] fail to locate the index files
4.0 years ago by N15 ▴ 160
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1
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1.3k
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Answer: A: using heat map to measure gene expression at different developmental stages
4.0 years ago by N15 ▴ 160
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1
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5.7k
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Comment: C: How to get KEGG pathway names in KEGG enrichment analysis using clusterprofiler
4.0 years ago by N15 ▴ 160
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5
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1.5k
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Can/should you interpret non-significant genes that cluster into modules with WGCNA?
wgcna stats RNA-Seq
4.0 years ago by N15 ▴ 160
0
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1
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5.7k
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Comment: C: How to get KEGG pathway names in KEGG enrichment analysis using clusterprofiler
4.0 years ago by N15 ▴ 160
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0
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847
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Comment: A: Mapped more transcripts than there were in fastq file - HOW?
4.0 years ago by N15 ▴ 160
0
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1
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5.7k
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Comment: C: How to get KEGG pathway names in KEGG enrichment analysis using clusterprofiler
4.0 years ago by N15 ▴ 160
0
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0
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1.1k
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Comment: C: TPM-like normalization of time series RNAseq data to minimize dispersion of coun
4.0 years ago by N15 ▴ 160
0
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1
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5.7k
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Comment: C: How to get KEGG pathway names in KEGG enrichment analysis using clusterprofiler
4.0 years ago by N15 ▴ 160
1
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1
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1.9k
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Answer: A: How to detect and remove bacterial sequences in assembled eukaryote genome
4.0 years ago by N15 ▴ 160
0
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0
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821
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Comment: C: Mass Spec: How to get unmatched MS spectra?
4.0 years ago by N15 ▴ 160
1
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1
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1.9k
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Answer: C: Gene set enrichment analysis input data
4.0 years ago by N15 ▴ 160
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0
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2.8k
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Comment: C: Raw counts after mapping to a reference transcriptome - possible?
4.0 years ago by N15 ▴ 160
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0
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6.1k
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Comment: C: Install BLAST in ubuntu
4.0 years ago by N15 ▴ 160
0
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0
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989
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Comment: C: Enrichment Analysis for Proteins
4.0 years ago by N15 ▴ 160
1
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1
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1.6k
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Comment: C: How to split dataset as train and test data not randomly in Python
4.0 years ago by N15 ▴ 160
1
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1
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640
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Answer: A: Merging three assembly results and elimination of duplication
4.0 years ago by N15 ▴ 160
0
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0
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2.8k
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Comment: C: Raw counts after mapping to a reference transcriptome - possible?
4.0 years ago by N15 ▴ 160
0
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0
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764
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Answer: A: Trancriptome genes reserch
4.0 years ago by N15 ▴ 160
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3
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2.8k
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Comment: A: Raw counts after mapping to a reference transcriptome - possible?
4.0 years ago by N15 ▴ 160
0
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1
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4.0k
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Comment: A: Why some rows are deleted from the heat map created
4.0 years ago by N15 ▴ 160
0
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4
replies
2.6k
views
How to directly compare normalized read counts across subgroups within a metatranscriptome?
normalization metatranscriptomics RNA-Seq deseq2 R
2.8 years ago by N15 ▴ 160
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