Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
42k
views
Comment: Comment: Batch effects : ComBat or removebatcheffects (limma package) ?
2 days ago by cwwong13 ▴ 40
2
votes
2
replies
545
views
Is MACS3 the same as MACS2?
MACS MACS3 MACS2
updated 3 months ago by 141k • written 3 months ago by ▴ 40
2
votes
2
replies
586
views
Forum: Do batches contain biological variations in omics data (RNAseq or scRNAseq)?
combat single-cell omics batch rnaseq
updated 4 months ago by 43k • written 4 months ago by ▴ 40
0
votes
1
reply
725
views
Comment: Comment: Tests for the linear and non-linear relationship between two genes
4 months ago by cwwong13 ▴ 40
0
votes
0
replies
725
views
Comment: Comment: Tests for the linear and non-linear relationship between two genes
4 months ago by cwwong13 ▴ 40
6
votes
5
replies
725
views
Tests for the linear and non-linear relationship between two genes
ode drc correlation regression rnaseq
updated 4 months ago by 82k • written 4 months ago by ▴ 40
0
votes
0
replies
2.1k
views
Comment: Comment: Technical replicates in Microarray data
5 months ago by cwwong13 ▴ 40
0
votes
1
reply
373
views
Testing the interaction term in single-cell RNAseq DEG analysis
DEG scRNAseq Seurat
updated 6 months ago by 82k • written 6 months ago by ▴ 40
0
votes
0
replies
1.2k
views
Comment: Comment: Highly inflated p-values in GWAS by regenie
7 months ago by cwwong13 ▴ 40
0
votes
0
replies
1.2k
views
Comment: Comment: Highly inflated p-values in GWAS by regenie
7 months ago by cwwong13 ▴ 40
0
votes
1
reply
1.2k
views
Comment: Comment: Highly inflated p-values in GWAS by regenie
7 months ago by cwwong13 ▴ 40
0
votes
7
replies
1.2k
views
Highly inflated p-values in GWAS by regenie
regenie plink gwas
7 months ago by cwwong13 ▴ 40
0
votes
1
reply
688
views
Comment: Comment: Keplen Meyer Curve Dropping to zero
9 months ago by cwwong13 ▴ 40
0
votes
0
replies
860
views
Comment: Comment: Should we assume UMI-based scRNAseq data is not compositional?
9 months ago by cwwong13 ▴ 40
0
votes
2
replies
860
views
Comment: Comment: Should we assume UMI-based scRNAseq data is not compositional?
9 months ago by cwwong13 ▴ 40
2
votes
7
replies
860
views
Should we assume UMI-based scRNAseq data is not compositional?
compositional scRNAseq
9 months ago by cwwong13 ▴ 40
0
votes
1
reply
516
views
Is it proper to compare two WGCNA matrixes if they were raised to different power (soft threshold)?
WGCNA r RNA-seq cluster
updated 9 months ago by 43k • written 9 months ago by ▴ 40
0
votes
0
replies
778
views
Comment: Comment: Summarizing permutation test/ bootstrap result for multiple samples for single-
13 months ago by cwwong13 ▴ 40
0
votes
0
replies
778
views
Comment: Comment: Summarizing permutation test/ bootstrap result for multiple samples for single-
13 months ago by cwwong13 ▴ 40
0
votes
3
replies
778
views
Summarizing permutation test/ bootstrap result for multiple samples for single-cell RNAseq data
single-cell RNA-seq
13 months ago by cwwong13 ▴ 40
0
votes
1
reply
499
views
overlay ggplot graphs like those merging channels in imagej
ggplot imagej
updated 14 months ago by 3.9k • written 14 months ago by ▴ 40
1
vote
0
replies
460
views
What are the differences between GSVA and ssGSEA (in layman's term)?
ssGSEA GSVA GSEA
14 months ago by cwwong13 ▴ 40
0
votes
0
replies
780
views
Comment: Comment: Do I need to adjust the pvalue if I am only going to test one gene from omics da
14 months ago by cwwong13 ▴ 40
0
votes
0
replies
780
views
Comment: Comment: Do I need to adjust the pvalue if I am only going to test one gene from omics da
14 months ago by cwwong13 ▴ 40
3
votes
4
replies
780
views
Do I need to adjust the pvalue if I am only going to test one gene from omics data containing many genes?
pvalue Omics RNAseq
14 months ago by cwwong13 ▴ 40
2
votes
2
replies
679
views
List of genes that are uniquely found in human (not in mouse)
orthologue genome gene
updated 17 months ago by 43k • written 17 months ago by ▴ 40
0
votes
1
reply
10k
views
Comment: Comment: map cDNA position on genomic position
18 months ago by cwwong13 ▴ 40
0
votes
1
reply
807
views
Is it possible to infer whether a patient is with homozygous with the alternative alleles (at two different location)
association WES variant genome
updated 23 months ago by ★ 2.9k • written 2.8 years ago by ▴ 40
0
votes
0
replies
1.1k
views
Comment: Comment: Determine sex/ gender of a mouse cell line via sequencing data
23 months ago by cwwong13 ▴ 40
2
votes
3
replies
1.1k
views
Determine sex/ gender of a mouse cell line via sequencing data
sequencing line cell
updated 22 months ago by ▴ 120 • written 23 months ago by ▴ 40
0
votes
0
replies
2.1k
views
Comment: Comment: The modules are not clustered together after WGCNA
2.0 years ago by cwwong13 ▴ 40
0
votes
1
reply
2.1k
views
Comment: Comment: The modules are not clustered together after WGCNA
2.0 years ago by cwwong13 ▴ 40
0
votes
1
reply
2.1k
views
Comment: Comment: The modules are not clustered together after WGCNA
2.0 years ago by cwwong13 ▴ 40
0
votes
1
reply
2.1k
views
Comment: Comment: The modules are not clustered together after WGCNA
2.0 years ago by cwwong13 ▴ 40
0
votes
1
reply
2.1k
views
Comment: Comment: The modules are not clustered together after WGCNA
2.0 years ago by cwwong13 ▴ 40
1
vote
10
replies
2.1k
views
The modules are not clustered together after WGCNA
cluster WGCNA r dendrograms
2.0 years ago by cwwong13 ▴ 40
2
votes
1
reply
715
views
Ways or packages to analyze single-cell RNAseq data that prepared following Tang's protocol
cell RNAseq seurat single
updated 2.1 years ago by 82k • written 2.1 years ago by ▴ 40
0
votes
1
reply
826
views
Comment: Comment: What is the current recommended way to process/ analyze Ion Torrent Proton RNAse
2.2 years ago by cwwong13 ▴ 40
1
vote
3
replies
826
views
What is the current recommended way to process/ analyze Ion Torrent Proton RNAseq data
RNAseq Proton Ion analysis Torrent pipeline processing
updated 2.2 years ago by 100k • written 2.2 years ago by ▴ 40
0
votes
3
replies
916
views
COVID-19 WGS sequencing for individuals having mRNA vaccination
mRNA COVID vaccine WGS
updated 2.3 years ago by 11k • written 2.3 years ago by ▴ 40
0
votes
0
replies
503
views
Molecular docking considerations
binding affinity vina biology docking structural ligand
2.5 years ago by cwwong13 ▴ 40
0
votes
1
reply
2.0k
views
Comment: Comment: Proper way(s) to perform enrichment analysis in R
2.6 years ago by cwwong13 ▴ 40
4
votes
4
replies
2.0k
views
Proper way(s) to perform enrichment analysis in R
GSEA analysis enrichment R RNAseq
updated 2.6 years ago by ▴ 90 • written 2.6 years ago by ▴ 40
0
votes
1
reply
4.1k
views
Comment: Comment: normalization to "housekeeping" genes of RNAseq data vs qPCR result
2.7 years ago by cwwong13 ▴ 40
2
votes
4
replies
4.1k
views
normalization to "housekeeping" genes of RNAseq data vs qPCR result
qPCR RNAseq
updated 2.7 years ago by 82k • written 2.7 years ago by ▴ 40
0
votes
1
reply
983
views
Comment: Comment: Assessing how similar/ different of activated pathways between multiple groups o
2.7 years ago by cwwong13 ▴ 40
0
votes
3
replies
983
views
Assessing how similar/ different of activated pathways between multiple groups of samples
pathway correlation test hypothesis
updated 2.7 years ago by 4.2k • written 2.7 years ago by ▴ 40
0
votes
0
replies
413
views
assessing relative contribution of samples/ organs towards a diseases in multi-tissue RNAseq
RNAseq
2.7 years ago by cwwong13 ▴ 40
0
votes
1
reply
653
views
Association analysis with SNP
association WGS GWAS SNP WES
updated 2.8 years ago by ▴ 1000 • written 2.8 years ago by ▴ 40
0
votes
0
replies
693
views
Comment: Comment: program/ software to generate large synthetic benchmark gene/ protein interactio
2.8 years ago by cwwong13 ▴ 40
74 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6