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4
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What does Picard tools cleansam and fixemate exactly do and what are the equivalents in samtools ?
picard tools samtools GATK
updated 6.7 years ago by ▴ 220 • written 8.2 years ago by ▴ 110
2
votes
6
replies
6.5k
views
How to "haploidize" diploid SNPs data in a vcf file
vcf SNP ploidy
updated 7.3 years ago by ★ 1.6k • written 7.3 years ago by ▴ 110
0
votes
1
reply
2.0k
views
Do we need to have separted embl files for each scaffold of the reference assembly to transfer the annotation to another assembly using RATT?
RATT annotation seqret
7.9 years ago by BioinfoNovice ▴ 110
1
vote
2
replies
1.5k
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Problem compiling DiscoSNP
DiscoSNP
updated 22 months ago by 44k • written 8.3 years ago by ▴ 110
2
votes
0
replies
3.1k
views
parameters in bwa mem
parameters bwa bwa-mem
updated 22 months ago by 44k • written 8.3 years ago by ▴ 110
3
votes
3
replies
3.6k
views
How to deal with adapter dimers?
trimgalore adapter-dimers trimming-adapters
updated 22 months ago by 44k • written 8.3 years ago by ▴ 110
1
vote
3
replies
3.9k
views
What is the difference between the "match score", the mapping quality score under the tmap mapping pipeline
match-score tmap mapping-quality alignment-score
updated 22 months ago by 44k • written 8.5 years ago by ▴ 110
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