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BioinfoNovice
BioinfoNovice
Reputation:
110
Joined:
10.7 years ago
Last seen:
7.5 years ago
Location:
France
Latest posts by user
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Answer: A: Error duirng the creation of .sqn file for the submission to NCBI
written by BioinfoNovice BioinfoNovice
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Comment: C: How to "haploidize" diploid SNPs data in a vcf file
written by BioinfoNovice BioinfoNovice
0 votes
6 replies
8.3K views
How to "haploidize" diploid SNPs data in a vcf file
vcf snp ploidy
updated by Len Trigg Len Trigg • written by BioinfoNovice BioinfoNovice
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1 view
Comment: C: PopGenome software: concatenating chromosomes and coalescent simulations
written by BioinfoNovice BioinfoNovice
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1 reply
2.3K views
Do we need to have separted embl files for each scaffold of the reference assembly to transfer the annotation to another assembly using RATT?
ratt annotation seqret
written by BioinfoNovice BioinfoNovice
4 votes
3 replies
7.4K views
What does Picard tools cleansam and fixemate exactly do and what are the equivalents in samtools ?
picard tools samtools gatk
updated by lamteva.vera lamteva.vera • written by BioinfoNovice BioinfoNovice
1 vote
0 replies
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Comment: Comment: Problem compiling DiscoSNP
updated by Ram Ram • written by BioinfoNovice BioinfoNovice
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2 replies
2.1K views
Problem compiling DiscoSNP
discosnp
updated by Ram Ram • written by BioinfoNovice BioinfoNovice
2 votes
0 replies
3.5K views
parameters in bwa mem
parameters bwa bwa-mem
updated by Ram Ram • written by BioinfoNovice BioinfoNovice
1 vote
0 replies
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Comment: C: How to deal with adapter dimers?
written by BioinfoNovice BioinfoNovice
1 vote
3 replies
4.3K views
How to deal with adapter dimers?
trimgalore adapter-dimers trimming-adapters
updated by Ram Ram • written by BioinfoNovice BioinfoNovice
1 vote
1 reply
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Comment: C: What is the difference between the "match score", the mapping quality score unde
written by BioinfoNovice BioinfoNovice
0 votes
3 replies
4.5K views
What is the difference between the "match score", the mapping quality score under the tmap mapping pipeline
match-score tmap mapping-quality alignment-score
updated by Ram Ram • written by BioinfoNovice BioinfoNovice
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