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Tom
Tom
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20
Joined:
10.7 years ago
Last seen:
5.4 years ago
Location:
United States
Latest posts by user
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Comment: C: Best way to download a subsection of a genome that matches a search query on NCB
written by Tom • Tom
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3 replies
1.2K views
Best way to download a subsection of a genome that matches a search query on NCBI's Blast?
blast ncbi alignment
written by Tom • Tom
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11 replies
3.8K views
How would I use BioPython to mass download some assemblies from NCBI?
ncbi biopython
updated by GenoMax GenoMax • written by Tom • Tom
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2 replies
2.8K views
How do I suppress warnings on command line blast?
blast command line
written by Tom • Tom
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1 reply
1 view
Comment: C: How do I count the number of nucleotides using jellyfish; can I obtain the numbe
written by Tom • Tom
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0 replies
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Comment: C: How do I count the number of nucleotides using jellyfish; can I obtain the numbe
written by Tom • Tom
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0 replies
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Comment: C: How do I count the number of nucleotides using jellyfish; can I obtain the numbe
written by Tom • Tom
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0 replies
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Comment: C: How do I count the number of nucleotides using jellyfish; can I obtain the numbe
written by Tom • Tom
0 votes
0 replies
1 view
Comment: C: How do I count the number of nucleotides using jellyfish; can I obtain the numbe
written by Tom • Tom
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2 replies
1 view
Comment: C: How do I count the number of nucleotides using jellyfish; can I obtain the numbe
written by Tom • Tom
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13 replies
4.7K views
How do I count the number of nucleotides using jellyfish; can I obtain the number of nucleotides that went into a mer_counts.jf from jellyfish stats?
jellyfish genomics k-mer kmer
written by Tom • Tom
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1 reply
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Comment: C: What are some drawbacks in using highly conserved genes to determine genomic com
written by Tom • Tom
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1 reply
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Comment: C: What are some drawbacks in using highly conserved genes to determine genomic com
written by Tom • Tom
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0 replies
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Comment: C: What are some drawbacks in using highly conserved genes to determine genomic com
written by Tom • Tom
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10 replies
3.4K views
What are some drawbacks in using highly conserved genes to determine genomic completeness?
genome bacteria sequencing assembly
updated by Ibrahim Tanyalcin Ibrahim Tanyalcin • written by Tom • Tom
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1 reply
1 view
Comment: C: Is there a specific option in BioPython that lets you call the gene name given a
written by Tom • Tom
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5 replies
3.1K views
Is there a specific option in BioPython that lets you call the gene name given an address of a nucleotide?
biopython
updated by Steven Lakin Steven Lakin • written by Tom • Tom
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2 replies
2.5K views
I have a genbank file and a list of addresses. I'd like to pull the exact nucleotide that corresponds to that address in biopython. How would I do that?
clcbio biopython
updated by Peter Peter • written by Tom • Tom
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1 reply
27 views
How would I quickly edit the fasta ID of each entry in a fasta file using BioPython?
biopython biopython
written by Tom • Tom
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0 replies
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Comment: C: How would you create a table for multiple organisms vs presence of multiple gene
written by Tom • Tom
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