How would I quickly edit the fasta ID of each entry in a fasta file using BioPython?
I'm trying to get acquainted with biopython as I've never used it before. I have a fasta that looks like this:
>name1_name1
ATCGATCG
>name2_name2
ATCGATCG
etc.. Unfortuantely the names are repated for some whatever reason, and I want to edit the fasta such that it's normal, like
>name1
ATCGATCG... etc
What's the cleanest way to do this?
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You should have a look at SeqIO, in which you can have a seqrecord object and edit the description attribute. Let me know if you can 't get it working!