This is a test version of Biostars. For the public version, visit https://www.biostars.org.
liuyifan2014
liuyifan2014
Reputation:
110
Joined:
10.9 years ago
Last seen:
10.2 years ago
Location:
United States
Latest posts by user
0 votes
0 replies
1 view
Answer: A: How to get the abundance of genes in metagenomes from MG RAST
written by liuyifan2014 • liuyifan2014
0 votes
2 replies
5.8K views
Should I use DNA or Protein sequence to build a HMM profile?
genome hmm gene protein dna
updated by oli4morelle • oli4morelle • written by liuyifan2014 • liuyifan2014
0 votes
1 reply
4.4K views
Is it necessary to increase annealing T during PCR when there are adaptors in primers?
illumina 16s pcr tm primer
updated by Anima Mundi Anima Mundi • written by liuyifan2014 • liuyifan2014
2 votes
4 replies
3.9K views
Is it ok to map RNA-seq reads on prokaryotic reference genome with bowtie2 ?
rna-seq alignment genome
updated by mark.ziemann mark.ziemann • written by liuyifan2014 • liuyifan2014
0 votes
0 replies
0 views
Comment: C: How to calculate FPKM values of interested gene
updated by Ram Ram • written by liuyifan2014 • liuyifan2014
1 vote
1 reply
3.2K views
Shall we move duplicated reads from metagenomic data?
sequencing next-gen gene prinseq duplicates
written by liuyifan2014 • liuyifan2014
0 votes
0 replies
2.0K views
Is estimated coverage of Nonpareil reliable?
software error metagenomic nonpareil coverage
written by liuyifan2014 • liuyifan2014
0 votes
1 reply
0 views
Comment: C: How to identify 16s sequences from binning data(contigs)?
written by liuyifan2014 • liuyifan2014
0 votes
0 replies
0 views
Comment: C: How to identify 16s sequences from binning data(contigs)?
written by liuyifan2014 • liuyifan2014
0 votes
0 replies
1.6K views
Looking for tools for taxonomic identification of 16s(part) using sencodary structure information?
sequence 16s secondary structure
written by liuyifan2014 • liuyifan2014
0 votes
0 replies
0 views
Comment: C: How to identify 16s sequences from binning data(contigs)?
written by liuyifan2014 • liuyifan2014
0 votes
1 reply
1 view
Comment: C: How to identify 16s sequences from binning data(contigs)?
written by liuyifan2014 • liuyifan2014
0 votes
1 reply
1 view
Comment: C: How to identify 16s sequences from binning data(contigs)?
written by liuyifan2014 • liuyifan2014
8 votes
18 replies
18K views
How to identify 16s sequences from binning data(contigs)?
genome assembly sequence blast
updated by Brian Bushnell Brian Bushnell • written by liuyifan2014 • liuyifan2014
0 votes
0 replies
2.8K views
How to reconstruct 16s rRNA sequences from illumina metagenomic shortgun data?
illumina 16s metagenomic
written by liuyifan2014 • liuyifan2014
Latest awards to user
TODO: Awards