This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Mahan
Mahan
Reputation:
70 (Trusted)
Joined:
11.6 years ago
Last seen:
3.1 years ago
Location:
Taipei, Taiwan
Twitter:
Mahantesh19_

Epidemiology | Project Manager | Social Media Strategy | Digital Marketing | Hiker

Latest posts by user
0 votes
0 replies
568 views
Getting nan values for bC bC_se bC_pval in mtCOJO results
mtcojo
updated by Ram 4.5K • | written by Mahan 7
0 votes
0 replies
0 views
Comment: Comment: Find gene regions (START and END) using gene IDs
written by Mahan 7
0 votes
3 replies
1.3K views
Find gene regions (START and END) using gene IDs
gene grch37
written by Mahan 7
0 votes
0 replies
716 views
How to extract a particular SNP allele counts from a .bgen file?
extract snp bgen
written by Mahan 7
0 votes
1 reply
1.4K views
How to obtain SNP rs ids using CHR:POS_A1_A2 format?
rs id bp snp
updated by Pierre Lindenbaum 17K • | written by Mahan 7
0 votes
0 replies
0 views
Comment: Comment: What is the best way to read PLINK .raw format files into R?
written by Mahan 7
0 votes
2 replies
2.5K views
What is the best way to read PLINK .raw format files into R?
.raw plink r format
written by Mahan 7
0 votes
0 replies
0 views
Comment: Comment: How to perform elastic net using lassosum?
written by Mahan 7
0 votes
2 replies
1.3K views
How to perform elastic net using lassosum?
lasso net elastic lassosum
written by Mahan 7
0 votes
0 replies
720 views
How to find the SNPs used in final best.pgs in lassosum?
lassoum lasso snps
updated by iraun 627 • | written by Mahan 7
0 votes
0 replies
721 views
Error in parse.pheno.covar(pheno = pheno, covar = covar, parsed = parsed.test, : length(pheno) == parsed$n is not TRUE
lassosum prs pheno
updated by Ram 4.5K • | written by Mahan 7
0 votes
1 reply
1.6K views
How can I convert plink (.bed, .fam and .bim) fileset to .pgen file format?
pgan plink bed
updated by Ram 4.5K • | written by Mahan 7
0 votes
0 replies
844 views
EAF using freq_cases and freq_controls
eaf allele-frequency
updated by Ram 4.5K • | written by Mahan 7
0 votes
0 replies
590 views
Obtain FREQ column for a summary statistics
statistic summary freq maf
written by Mahan 7
0 votes
0 replies
747 views
Get MAF using the rs is from european reference panel
snp id frequency allele maf minor rs
written by Mahan 7
0 votes
0 replies
0 views
Comment: Comment: How to search dbSNP using a list of SNPs and retrieve Gene name (hgnc symbol if
written by Mahan 7
0 votes
1 reply
0 views
Comment: Comment: How to search dbSNP using a list of SNPs and retrieve Gene name (hgnc symbol if
updated by GenoMax 16K • | written by Mahan 7
0 votes
1 reply
1.1K views
How to classify the SNPs/gene loci as reported or novel?
analysis loci novel meta snps gene reported
updated by Ankit 52 • | written by Mahan 7
0 votes
2 replies
0 views
Comment: Comment: SNP rs ID batch query
written by Mahan 7
0 votes
0 replies
0 views
Comment: Comment: Get the CHR number and POS using rs id
written by Mahan 7
Latest awards to user
TODO: Awards