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pubsurfted
pubsurfted
Reputation:
60
Joined:
3.8 years ago
Last seen:
2.4 years ago
Location:
Pakistan
Latest posts by user
1 vote
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Comment: Comment: How to manually trim FASTA file sequences and store it in a new FASTA file?
written by pubsurfted • pubsurfted
0 votes
2 replies
1.7K views
How to manually trim FASTA file sequences and store it in a new FASTA file?
fasta
written by pubsurfted • pubsurfted
0 votes
1 reply
0 views
Comment: Comment: Rseqc infer_experiment.py: 0 usable reads sampled and unknown data type
written by pubsurfted • pubsurfted
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1 reply
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Comment: Comment: Rseqc infer_experiment.py: 0 usable reads sampled and unknown data type
written by pubsurfted • pubsurfted
0 votes
1 reply
0 views
Comment: Comment: Rseqc infer_experiment.py: 0 usable reads sampled and unknown data type
written by pubsurfted • pubsurfted
0 votes
1 reply
0 views
Comment: Comment: Rseqc infer_experiment.py: 0 usable reads sampled and unknown data type
written by pubsurfted • pubsurfted
0 votes
9 replies
3.4K views
Rseqc infer_experiment.py: 0 usable reads sampled and unknown data type
rseqc infer_experiment.py rna-seq
updated by mazegriff • mazegriff • written by pubsurfted • pubsurfted
0 votes
2 replies
1.6K views
Where to get a reference gene model in bed fomat? Is the only option converting it from gtf to bed?
rna-seq
updated by alejandrogzi • alejandrogzi • written by pubsurfted • pubsurfted
0 votes
0 replies
0 views
Comment: Comment: Building index with kallisto, keeps getting killed.
written by pubsurfted • pubsurfted
0 votes
1 reply
0 views
Comment: Comment: Building index with kallisto, keeps getting killed.
written by pubsurfted • pubsurfted
0 votes
0 replies
0 views
Comment: Comment: How to find rna strand direction before alignment?
written by pubsurfted • pubsurfted
0 votes
7 replies
4.6K views
Building index with kallisto, keeps getting killed.
kallisto
updated by Michael Dondrup Michael Dondrup • written by pubsurfted • pubsurfted
0 votes
1 reply
0 views
Comment: Comment: How to find rna strand direction before alignment?
written by pubsurfted • pubsurfted
0 votes
2 replies
0 views
Comment: Comment: How to find rna strand direction before alignment?
written by pubsurfted • pubsurfted
1 vote
0 replies
0 views
Comment: Comment: How to find rna strand direction before alignment?
written by pubsurfted • pubsurfted
0 votes
2 replies
1.7K views
Does anyone have experience using findtail?
poly-a-tail
updated by Ram Ram • written by pubsurfted • pubsurfted
0 votes
1 reply
1.1K views
Understanding how-are-we-stranded-here and salmon parameters
rna-seq
updated by GenoMax GenoMax • written by pubsurfted • pubsurfted
2 votes
18 replies
6.1K views
How to find rna strand direction before alignment?
rna-seq
updated by Juke34 Juke34 • written by pubsurfted • pubsurfted
0 votes
5 replies
4.2K views
When is it advantageous to use a non-splice aware aligner like BowTie2 over a splice aware one like Hisat2?
illumina rna-seq paired short-reads
updated by i.sudbery i.sudbery • written by pubsurfted • pubsurfted
0 votes
1 reply
1.3K views
PolyA Tail Detection in RNA-seq data
rna-seq polya
updated by Ram Ram • written by pubsurfted • pubsurfted
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