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NGS pipeline analyses
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3.1 years ago
Kizuna • 780
France, Paris

Hi Biostars Users,

I am rookie in bio-informatics interested in undergoing NGS training to learn how to build NGS pipeline for whole exome sequencing analyses.

May you please guide me to find a suitable training program?

Best,

Kizuna

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Thank you !

Do you have any information on-site training programs held in institutes like EBI ? Broad institute ? Sanger institute ?

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Sorry, I don't keep track of them but I am pretty sure that they offer variety of NGS training programs. If you search here on Biostars you may find such postings. For example, one such post is https://www.biostars.org/p/96718/#97192

Post it as a separate question if you need more help.

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17 months ago
Deutschland

Perhaps one of out trainings might be of interest to you!

Check out http://www.ecseq.com/training.html

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4.4 years ago
alistairnward • 210
United States

Hi Kizuna,

We, in Gabor Marths lab at Boston College, have an NGS tool and pipeline launcher that is simple to use and can perform a variety of different analyses with prebuilt pipelines. Customizing pipelines is straightforward and we are always available to help. Check out our site at http://gkno.me. The package is easy to download, install and run.

Good luck,

Alistair Ward

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3.1 years ago
Kizuna • 780
France, Paris

Tx David, however I am searching for trainings in WES.

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Well, around 90% of the analyses are the same. But of course, the downstream analysis (everything after mapping) is a bit different. Perhaps we will offer WES workshops next time! :)

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3.1 years ago
Kizuna • 780
France, Paris

Sounds very interesting..

Many thanks, I will gladly download it and try it :)

I will let you know

kiz

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