Hi,

I am trying to use the bcftools run-roh functionality on a set of 5 vcf files. I used the bcftools roh command and was able to get lists of roh for each sample individually, but now I want to see any regions hared across the 5 samples. I keep running into the following error:

Error: The FORMAT/PL tag not found in the header, consider running with -G

Even though this tag exists in all the vcf files. I can't really find any other documentation on bcftools run-roh either to troubleshoot this. If anyone has any experience with this, it would be very helpful, thank you!