How to use LOEUF plugin in VEP?
1 answer
Looks like that file is available from Nature: https://static-content.springer.com/esm/art%3A10.1038%2Fs41586-020-2308-7/MediaObjects/41586_2020_2308_MOESM4_ESM.zip
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The plug-in code is present at: https://github.com/Ensembl/VEP_plugins/blob/release/113/LOEUF.pm Is this link not working for you or the code you download does not work?
Inside the loeuf.pm there is a link for the LOEUF scores that can be downloaded from https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7334197/bin/41586_2020_2308_MOESM4_ESM.zip but the link is not working.