Identification of SSR markers from RNA-seq data

I have a set of RNA-Seq data. I was asked to findout SSR Markers from it. I have worked with MISA tool and in my experience it gave prosmissing markers. But can i use MISA on RNA-seq paired-end reads. If not which tool can be used for that?

misa ssr-markers data rna-seq

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written 1.7 years ago by Kutti •

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