KEGG MAPPER Reconstruct
Hello,
I need to make a KEGG map to see the metabolic pathways. I have two organisms with their GeneIds and their KOs to do the Reconstruct section of KEGG MAPPER. One is genes overexpressed in a condition while the other is genes underexpressed in that condition.
I understand that green is the first organism I introduce, red is the second organism I introduce. But what is the blue color?? Why does it appear but it shouldn't because I don't have common genes in both.
If not, how could I make a metabolic map that shows me the genes of two different organisms, one in green and one in red, with KEGG MAPPER?
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andres.firrincieli
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Julián •
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Julián •
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Also say that what I am looking at is the general metabolic route 01100
The "Global and overview maps" use blue to highlight the KO shared by the two datasets. This is caused by up- and down-regulated genes having the same KO