How to Visualize ATAC-seq Peaks with Transcription Factor Binding Sites Using IGV
Hi, I have a question regarding visualising ATACseq peaks and transcription factor binding sites. I uploaded bigwig files to IGV and I am wondering if there is a way to label transcription factor binding sites on top of those tracks based on publically available data. If that is possible can anyone let me know how to do it? I am doing my analysis in R. Thanks a lot for help!
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Bastien Hervé
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giegie •
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giegie •
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If you have a list of TFs from publically available data with their coordinates, you can format them as a bed file and create a new IGV track with it.
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