Hello there,

I am currently working on a project where I need to figure out which parts of a yeast hybrid genome strain came from which of the parental strains.

I am new to this kind of analysis and I would appreciate if someone could shed some light here, on which software is most recommended for my data. In addition to my raw reads (nanopore), i have the assembled genome (in fasta) of the two parental strains and the hybrid genome. It is worth mentioning that both parental strains are 1N and only the hybrid is 2N.

Thanks in advance!