xCell different between R and website
I did xCell on the website and on R but I have two different results:
and
you have any idea of why? Did it happen to someone else? (I used the same matrix for both the analysis)
Thank you
xcell
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michelafrancesconi9
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What type of data did you analyze ? Is it RNA-seq ?
yes, is a matrix of bulk rna-seq
Did you check the RNA-seq box on the website ?
Yes, on the website i put N=64 and I sign for RNA-seq data bottom
Maybe try to provide a few lines of your dataset to the package creator, as I saw you opened an issue on gihub
ok thank you! I will try because I have no idea of why I have different results