Convert haploid chrX to homozygous diploid in VCF
Hey everyone, I have a file where phasing using Beagle fails due to some variants in chrXs being haploid. I found out that beagle requires them to be diploid. Is there any script that can accomplish this reliably?
Thanks!
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Pierre Lindenbaum
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ThunderPhoenix •
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ThunderPhoenix •
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