About metaRNASeq
everyone!
I want to do meta-analysis of RNA-Seq. I am thinking of doing Salmon -> edgeR -> metaRNASeq. I want to use metaRNASeq, but I don't know what the param and dispFuncs data mean.
Should I simply use count data for param? (I plan to create my own TRUE or FALSE for DE)
The value of dispFuncs is described as the two estimated coefficients (α0 and α1), what does it mean? How can I get the values for dispFuncs?
We would be grateful if you could tell us.
• 695 views
•
link
written
by
yoshifumimiya •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
the dispersion estimation of edgeR and DESeq2
written by tommy •
-
Differential Expression using Isoseq-supplemented reference transcriptome
written by Calum •
-
How to use filterbyExpr with DESeq2?
written by biotrekker •
-
Quantifying GFP and GAL4 reads in drosophila
written by nhaus •
-
RNA-seq replicates not clustering
written by sckinta
-
kallisto: strand-specific and fragment length calculation
written by user230613
-
Need help with Support Vector Machines.
written by spacegeek1212 •
-
Cluster analysis for hypothesis veryfication
written by krzysztof.szade •
-
Subsetting a fasta file using seqinr in R
written by henrikkjeldal •
-
EdgeR TMM normalisation
written by AW
