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user230613
user230613
Reputation:
380 (Trusted)
Joined:
12.0 years ago
Last seen:
2.9 years ago
Location:
Europe
Latest posts by user
0 votes
0 replies
835 views
Differentiate sequenced and imputed variants in BGEN files
imputation bgen ukb
written by user230613 38
0 votes
1 reply
2.0K views
Calculating PRS from pre-computed PGS Catalog
gwas prs pgs
updated by UnivStudent 44 • | written by user230613 38
0 votes
0 replies
0 views
Comment: Comment: fgsea after deseq2, criteria for ranking DEGs.
written by user230613 38
0 votes
1 reply
0 views
Comment: Comment: fgsea after deseq2, criteria for ranking DEGs.
written by user230613 38
0 votes
1 reply
0 views
Comment: Comment: fgsea after deseq2, criteria for ranking DEGs.
written by user230613 38
5 votes
10 replies
14K views
fgsea after deseq2, criteria for ranking DEGs.
gsea
updated by ATpoint 9.1K • | written by user230613 38
0 votes
1 reply
0 views
Comment: Comment: Gene Set Enrichment Analysis
written by user230613 38
0 votes
0 replies
0 views
Comment: Comment: lfcShrink MA plot comparison
written by user230613 38
0 votes
1 reply
0 views
Comment: Comment: lfcShrink MA plot comparison
written by user230613 38
0 votes
1 reply
0 views
Comment: Comment: lfcShrink MA plot comparison
written by user230613 38
1 vote
6 replies
2.4K views
lfcShrink MA plot comparison
lfcshrink deseq2
updated by Michael Love 262 • | written by user230613 38
0 votes
1 reply
0 views
Comment: C: convert CDS coordinates of a GTF to amino acid coordinates respect the resultant
written by user230613 38
0 votes
3 replies
2.1K views
convert CDS coordinates of a GTF to amino acid coordinates respect the resultant protein
protein coordinates
written by user230613 38
0 votes
0 replies
0 views
Comment: C: Difference between the Fasta files from UCSC and Gencode/Ensembl
written by user230613 38
0 votes
1 reply
2.4K views
Mate negative strand flag does not match read negative strand flag of mate
bam validatesamfile rnaseq
updated by Santosh Anand 582 • | written by user230613 38
0 votes
0 replies
0 views
Comment: C: TPM VS FPKM VS TMM and K-mer specific expression quantification
written by user230613 38
0 votes
1 reply
0 views
Comment: C: TPM VS FPKM VS TMM and K-mer specific expression quantification
written by user230613 38
2 votes
1 reply
5.3K views
GATK; Variant calling RNA-Seq best practices: bam processing steps
variant-calling rna-seq gatk
updated by Ram 4.5K • | written by user230613 38
0 votes
1 reply
0 views
Comment: C: Specific sequence abundance using RNA-Seq
written by user230613 38
0 votes
4 replies
2.2K views
Specific sequence abundance using RNA-Seq
expression rna-seq
updated by Brian Bushnell 2.0K • | written by user230613 38
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