This is a test version of Biostars. For the public version, visit https://www.biostars.org.
How can I build archetypal consensus motifs to represent different cluster motifs

Hi, everyone.

I am wondering whether there is a tool can help to build archetypal consensus motifs to represent different cluster motifs.

For example, I calculate the all motif similarity and cluster the motif into 100 clusters. Then I want to use 100 motif model to represnt this 100 clusters.

I have read this article https://www.vierstra.org/resources/motif_clustering, and find it is a good resouce. But I find it is hard to use this pipeline for me and apply this methods in plants motif. So I am wondering whether someone can introduce some good tools.

Best wishes

Guandong Shang

motif

0 answers

No answers yet.

Log in to answer this question.