More posts like this
-
miRNA alignment and count generation
written by omicon •Hi everyone, I'm having some doubts and confusion regarding the alignment of miRNAs. I'm currently working with miRNA-seq data. I've already completed the trimming and …
-
how to do an "reverse" oncoplot in maftools
written by JULIA HELENA •Hi! I'm learning new skills on Rstudio and maftools for my final paper in graduation. I'm analyzing some genes of my samples (thyroid cancer samples, …
-
GDC Client 500 Server Error
written by loy_loy •Hi everyone, I am downloading data from GDC legacy archive with the GDC client. I already downloaded data without any problems. Now I get the …
-
How to filter Germline variants from vcf file?
written by leukippus0116 •Hello. I'm new to Bioinformatics working on NGS data. Now I'm working on detecting SNP variants causing multiple sclerosis. I selected some genes for target …
-
Does anybody know how to do a local install of samtools on centos without using sudo?
written by kristina.mahanI'm using a server at work and their version of samtools and bwa is way outdated. I asked the server guy to update them and …
-
WGCNA TOM calculation time
written by tothepointI am currently working on co-expression analysis for a data set of around 60,000 genes and running the job on server. I am currently waiting …
-
Forum: What do you work on while waiting on your programs to finish?
written by skbrimerI have a few jobs that take all the limited resources that I have currently and it looks like I'm not working. So I generally …
-
Determine the pool size - data from EBI
written by mufernando •Hi, I've been working with a few pooled sequences from EBI (http://www.ebi.ac.uk/ena/data/view/PRJNA256231) and now I'm trying to do the SNP calling with CRISP. However, for …
-
Conversion tools for GWAS
written by danielestrife •Good morning, actually I'm working for a GWAS for the metabolic syndrome, I've `.bed` `.bim` and `.fam` files also `.ped` and `.map`, I'm looking for …
-
(Mira) Configure: Error: Could Not Find A Version Of The Library! (Boost::Thread Library)
written by diltsjeri<pre><code>checking whether the Boost::Thread library is available... yes configure: error: Could not find a version of the library! </code></pre> <p>Hi,</p> <p>I'm trying to install MIRA, …