Looking for COVID-19 patient sample FastQ/VCF files
Hello,
Does anyone know of any publicly available COVID-19 FastQ/VCF data?
• 1,381 views
•
link
updated
by
ATpoint
•
written
by
screadore •
•
written
by
screadore •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
vcf multisample
written by Donald •
-
Datasets of dog genomes to determine breed composition of an unknown dog
written by petrstep •
-
Low mapping rate
written by yoshifumimiya •
-
Universal Human Reference RNA Sample
written by kstangline •
-
Looking for a Whole Genome Sequencing GrCH38 Control group of roughly 250 samples
written by screadore •
-
Bulk RNAseq data for COVID-19 with patient metadata?
written by DeNovo •
-
COVID-19 case number predictions for Europe
written by lefthandgergo •
-
TCR/BCR repertoire Analysis
written by phoenix.sum13 •
-
covid-19 publicly available data
written by cocchi.e89
-
Public COVID-19 bam files
written by juniper-
but why?...
what exactly do you need - genome DNA reads from a human who had COVID or a sequence of the virus itself?
In any case, raw fastq files from patients are always access-restricted, e.g. at GISAID, dbGAP or ENA/EBI, so you or rather your PI would need to request access. VCF files might be easier/faster to get.