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Data(Base) For Gene Annotations/Models That Include Alternative Splicing For Human?

I'm aware of the gencode annotation, and RefSeq annotation. Those do a good job at providing gene annotations & models, showing where all the known exons / introns are. In practice, these types of annotations often mean presenting for each gene:

a collection of intervals that go together to form a gene, and some sort of meaningful tag/annotation for each of these intervals

Based on recent studies of splicing, what is available out there (supplementary materials / annotation files / databases) that do not only list intervals + annotations for a gene but also show alternative splicing structure? Present all the observed transcripts / isoforms in one annotation?

Thank you!

transcription splicing database

2 answers

Not sure if this is what you are looking for, but AceView lists a ton of alternative splicing isoforms fora ton of genes.

Ensembl is also well populated for human alternative splicing in their own graphic displays

You can look at the example for BACE1 in both

http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000186318;r=11:117156402-117186972;t=ENST00000313005

http://www.ncbi.nlm.nih.gov/IEB/Research/Acembly/av.cgi?db=human&term=BACE1&submit=Go

There maybe differences though

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