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a.rex
a.rex
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350
Joined:
10.0 years ago
Last seen:
5.4 years ago
Latest posts by user
0 votes
2 replies
3.2K views
UMAP of 10X and SmartSeq2 datasets on same plot
smartseq2 singlecellrna-seq umap 10xgenomics
updated by ATpoint ATpoint • written by a.rex a.rex
1 vote
1 reply
3.1K views
TPM normalization factors in RNA-seq
rna-seq
written by a.rex a.rex
1 vote
0 replies
1.5K views
Estimate Library Complexity Output Histogram - what do duplicate sets mean exactly?
picard alignment
written by a.rex a.rex
0 votes
3 replies
1.4K views
How to interpret a short TLEN with 75bp PE seq?
sequence alignment
updated by Pierre Lindenbaum Pierre Lindenbaum • written by a.rex a.rex
0 votes
1 reply
0 views
Comment: C: Insert size of -20bp with ATAC-seq?
written by a.rex a.rex
0 votes
1 reply
0 views
Comment: C: Insert size of -20bp with ATAC-seq?
written by a.rex a.rex
0 votes
3 replies
1.5K views
Understanding 9th field of Bam file - insert size?
sequencing alignment
updated by ATpoint ATpoint • written by a.rex a.rex
0 votes
0 replies
0 views
Comment: A: Insert size of -20bp with ATAC-seq?
written by a.rex a.rex
0 votes
0 replies
0 views
Comment: C: Insert size of -20bp with ATAC-seq?
written by a.rex a.rex
0 votes
8 replies
6.3K views
Insert size of ~20bp with ATAC-seq?
alignment sequencing atac-seq
updated by ATpoint ATpoint • written by a.rex a.rex
0 votes
3 replies
3.5K views
How can I use featurecounts after generating a bam file using BWA?
rna-seq features counts
updated by h.mon h.mon • written by a.rex a.rex
1 vote
0 replies
1.9K views
How can I get Kimura distances for individual loci from my align.fa file from RepeatMasker
repeatmasker
updated by Biostar Biostar • written by a.rex a.rex
1 vote
1 reply
3.6K views
Using FeatureCounts for ChIP-seq normalised files?
deeptools chip-seq
updated by Devon Ryan Devon Ryan • written by a.rex a.rex
0 votes
1 reply
1 view
Comment: C: Trouble with danpos2 installation - can anyone help?
written by a.rex a.rex
0 votes
1 reply
1 view
Comment: C: Trouble with danpos2 installation - can anyone help?
written by a.rex a.rex
0 votes
0 replies
1.6K views
Can I use deeptools to calculate nucleosome positions?
deeptools atac
written by a.rex a.rex
1 vote
6 replies
3.6K views
Trouble with danpos2 installation - can anyone help?
danpos installation python
updated by h.mon h.mon • written by a.rex a.rex
0 votes
1 reply
2.1K views
Performing differential binding analyses between ChIP samples using Deeptools (SES method normalization)
chip-seq
updated by Jingyue • Jingyue • written by a.rex a.rex
0 votes
0 replies
0 views
Comment: C: How can I correlate ATAC-seq peak signal with enhancer ChIP-seq mark signal (H3K
written by a.rex a.rex
0 votes
6 replies
4.1K views
How can I correlate ATAC-seq peak signal with enhancer ChIP-seq mark signal (H3K4me1)?
atac chip
written by a.rex a.rex
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