There are some (<=50) solid tissue normals. no blood normals.
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Zhenyu Zhang
TCGA: How to detect normal and tumor samples in PRAD dataset?
I did the downloaded DNA methylation - Illumina Human Methylation 450 dataset (GDC TCGA Prostate Cancer (PRAD)) using https://gdc.xenahubs.net.
I want to methylation analysis correlation with my RNA-seq data, for this, I need to know which are normal and tumor samples. How can I find this information? Which samples are normal x tumor?
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carolgalah •
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carolgalah •
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You can infer this from the barcode - please take a look: Meaning letters in TCGA sample barcode field
However, if my memory serves me correctly, there are no (i.e. zero) normal samples for PRAD RNA-seq.
Kevin
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Kevin Blighe
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