Pairwise distance matrix using biopython
Hello, I am wondering what is the most efficient way to calculate a distance matrix for a set of 400 sequences each is ~120 bp in length. I would prefer not use an outside tool but do it all in python
Thank you so much
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Elephantdumbo •
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If you already have an alignment, you can do this with the
Phylotools inbiopython: https://biopython.readthedocs.io/en/latest/api/Bio.Phylo.TreeConstruction.html