This is a test version of Biostars. For the public version, visit https://www.biostars.org.
How represent isoforms in different tracks in a genome browser?

Hi,

I'm trying to represent in a genome browser RNA-seq data analyzed with salmon. I want to differentiate between isoforms of the same gene. I try with --dumpEq option of salmon, but only get the number of counts of every isoform, the question is, if is possible separate the reads from every isoform in different tracks and visualize the isoforms separately.

thanks for the support. B.

rna-seq isoform reads alignment salmon

0 answers

No answers yet.

Log in to answer this question.