Entering edit mode
4.2 years ago
colin.kern
★
1.1k
I have run the Juicer pipeline to generate a .hic file for some Hi-C data and I want to check if some pairs of genomic regions I have are in contact. I'm not seeing any directions in the Juicer documentation for doing this. Do I need to use the dump command to export the matrix and use external scripts, or is there a way to can do this directly with the .hic file?
