Pair Orientation in IGV

I'm new to genomics platform. When I was analyzing the alignment data in IGV i came across the word "Pair Orientation"with values "F1R2", "F2R1". I don't know what they are. Can someone explain what these values are?

Thanks in advance!

Karthick

sequencing genome next-gen assembly gene

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written 6.7 years ago by karthick.n •

see Orientation in paired-end sequencing?

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written 6.7 years ago by Pierre Lindenbaum

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