Namespace dependency not required limma
I want to write an R package and perform some functions in limma package. When I used importFrom limma lmFit
I got the error:
> Namespace dependency not required: ‘limma’.
What's the problem?
r
limma
bioconductor
• 1,252 views
•
link
updated
by
Ram
•
written
by
Eric Wang •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
package ‘GenomeInfoDb’ could not be loaded
written by exferin •I created a new conda environment and then I used conda to install rstracklayer and languageserver. The problem appeared when I try to load the …
-
Problem while uploading DESeq2 library
written by Amr •Problem while uploading DESeq2 library: library(DESeq2) Loading required package: GenomicRanges Loading required package: GenomeInfoDb Error: package or namespace load failed for ‘GenomeInfoDb’ in loadNamespace(i, c(lib.loc, …
-
Installation error - Seurat/SeuratObject/rgeos - in server-based RStudio
written by Heidi •Hey. Today I can't load the Seurat package: > library(Seurat) Error: package or namespace load failed for ‘Seurat’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck …
-
monocle3 and spData
written by BogdanDear All, has anyone encountered the situation below : some functions in Monocle3 on my machine requires "spData" and when I do aim to install …
-
trinity run_DE_analysis.pl Failed with error: ‘package ‘limma’ could not be loaded’
written by Rajesh •Hi Experts, can someone please help me with this error while running `run_DE_analysis.pl` for DESeq2 analysis Loading required package: edgeR Loading required package: limma Error: …
-
GEOquery loading error.
written by angus.j.g.campbell •I started getting a strange error when trying to load GEOquery with `library(GEOquery)`. Error: package or namespace load failed for ‘GEOquery’ in loadNamespace(i, c(lib.loc, .libPaths()), …
-
Error in loading oligoClasses in my R studio
written by chiagozieduru •please, I just used my biocmanager to install oligoCLasses version 3.12 on my R studio. but when I try loading the library package, it keeps …
-
problem in loading systemPipeR and RNASeqGene packages in R 3.4.1
written by nazaninhoseinkhanDear all I want to run RNASeq analysis in R. Unfortunately when I try to load systemPipeR or RNASeqGene packages in R 3.4.1, I get …
-
Error in running ReactomePA
written by niutsterHi, I want to do pathway analysis with "ReactomePA" in R, I installed all dependencies but I get this error: Error : Functions found when …
-
Error running BiodiversityRGUI() for BiodiversityR package in R.
written by lakhujanivijayI am encountering below error while running BiodiversityRGUI() in R. Please see below error message: > library(BiodiversityR) Loading required package: tcltk Loading required package: vegan …
Are you using
lmFitin the function to whose header thisimportFromis added?Yes,I used devtools package to write my package.