I started getting a strange error when trying to load GEOquery with library(GEOquery).
Error: package or namespace load failed for ‘GEOquery’ in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]): namespace ‘rlang’ 0.4.9 is already loaded, but >= 0.4.10 is required
When I run
devtools::install_github('r-lib/rlang')
I get ...
Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) :
namespace ‘rlang’ 0.4.9 is already loaded, but >= 0.4.10 is required
Has anyone dealt with this before? Restarting my R session has no effect.
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angus.j.g.campbell •
GEOquery works on the R version (4.0). To update the R version, use the updateR() command. Before running updateR(), install installr package if you don’t have this package installed already.
After updating the R version, execute the following command to install GEOquery -
if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("GEOquery")
Thank you in the end I had to uninstall rlang, and geoquery and then reinstall them and it seems to have fixed the bugs
Angus
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Hello angus.j.g.campbell!
It appears that your post has been cross-posted to another site: https://bioinformatics.stackexchange.com/questions/15486/calling-geoquerry-error-while-loading-the-library
This is typically not recommended as it runs the risk of annoying people in both communities.