convert MSTRG to human-readable format

Hello everyone,

I used the hisat2-stringtie and ballgown pipeline to analyze RNA-seq data and got result with MSTRG format. I tried different combinations and scripts to convert MSTRG to ensemble format but none of them worked ...

so I'm looking for a Hero who have experience with this pipeline and kindly help me to give sense to my data analysis

Many Thanks

rna-seq mstrg

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written 7.1 years ago by Morris_Chair

hey Morris, did you find a solution to your problem. I have the same issue

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written 6.8 years ago by c_u

Hi Chahat, I handed up using a different pipeline for the RNA-seq analysis, sorry I can't help

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written 6.8 years ago by Morris_Chair

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