Calculating pausing index/traveling ratio
Hello All,
I would like to ask how can I calculate pausing index or traveling ratio of PolII having BAM files?
Thanks in advance.
chip-seq
bam
alignment
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abedkurdi10 •
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Pol II chip-seq data analysis
Really? Is that an answer? What I meant is how exactly I can apply it, which tools to use, any starting point!
You seem to mistake this community with a consulting platform that provides complete and custom solutions by request. The link I added mentions a paper where this kind of analysis has been performed. The first step would be to read it and its method section and see what you can learn. This is also a comment, not an answer. With your current attitude you are not motivating people to invest time to help you at all. Brief Reminder On How To Ask A Good Question