how should i find the correlation between DNA sequence and phenotype across species?
i have a phenotype that i want to investigate, say phenotype A. and i also get a sequence 1. i want to search that if the species get the sequence 1 would obtain phenotype A(or the degree difference), and the species do not have the sequence 1, do not have phenotype A. what is the correlation between sequence 1 and phenotype A?
i want to study the relationship among all mammals.
how should i proceed?
is there any paper that related?
any help would be appreciated!
Thanks a lot !
• 1,196 views
•
link
updated
by
Joe
•
written
by
bangbang3332 •
•
written
by
bangbang3332 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Setting up a case control with 18 VCFs in plink?
written by atopasn1 •
-
Identifying cis variants in E. coli
written by fufor94 •
-
Multiple phenotypes based GWAS approach
written by Shicheng Guo
-
miRNA-mRNA correlation from TCGA data
written by saruman •
-
use 16s rRNA data to predict metabolic pathway according to genome-scale network reconstructions
written by fanglujing •
-
Doing a remote blastn against the refseq_rna database for mammals
written by age00 •
-
how to analyze each of the genes in a dataset, looking for a positive or negative linear correlati…
written by tuancragmere •
-
gene synteny analysis without chromosome information
written by 402374688 •
-
Augustus: Choosing Species
written by emmajosenl •
-
What Is The Gene'S Correlation With Phenotype In Detail Using The Gsea
written by Zhilong Jia
I’ve changed this from a Tutorial to a question. Tutorials are for posters offering tutorials, not for requesting one.
Reading your question it looks like you might be interested in an approach similar to genome wide association mapping. This is a review I found, there are many similar papers.
thank you so much! i would read carefully.