how to get R squared value in scatter plot in cummeRbund

Dear all i need to get R squared value in scatter plot in cummeRbund? how can i get that thanks

r rna-seq

• 1,425 views • link

written 7.6 years ago by mra8187 •

Looks like plots are created using ggplot2, maybe use myPlot + annotate("text", ...), see the manual:

Create an annotation layer

• 0 views • link

written 7.6 years ago by zx8754

0 answers

No answers yet.

More posts like this

Plink2 haplotype results interpretation
written 3.3 years ago by alva •

Dear All, How do I interpret the results from PLINK2.0 when generating haplotype frequencies for three variants? plink2 --bfile mydata --ld 12439 12340 --out gene_12439_12340 …
ScatterPlot with CummeRbund
written 6.0 years ago by Aynur •

Hello, I am new to bioinformatics and I am trying to get a scatterplot for my FPKM values, which I got from STAR-Cuffdiff pipeline. I …
convert forward and reverse fastq file to one sra file
written 8.3 years ago by mra8187 •

Dear all how can i convert forward and reverse fastq file to one sra file? i search a lot but i can not find any …
how to using STAR ?
written 9.0 years ago by mra8187 •

Dear all I am trying to find SNP from sheep DNA . can i use STAR to map and align DNA ? how can i …
Scatter plot by cummeRbund
written 9.1 years ago by saj98

Hello Everyone I am using cummeRbund package to create scatter plot. I need help to guide me how to present the significant genes in different …
error in bowtie 2
written 9.5 years ago by mra8187 •

Dear all When I use bowtie 2 i get this error What can I do ? (ERR): bowtie2-align exited with value 137
Plotting graphs using R - how to 'omit' specific values?
written 9.6 years ago by Genosa

Hello, Asking for help from R experts here. I'm totally new in R and I'm just spending lots of time to figure out how to …
how to get SRA data
written 9.7 years ago by mra8187 •

Dear all how can i get this data from ncbi ? https://www.ncbi.nlm.nih.gov/sra/SRX1835119[accn] thank you
How to plot ENc Vs GC3 graph
written 10.0 years ago by Nitha •

How to plot ENc Vs GC3 graph I have got ENc value and GC3 value.. now I need to plot the graph.. Main problem is …
Visualizing K Mean Clustering Results
written 14.6 years ago by RB •

<p>Hi All</p> <p>I clustered my data using Kmean clustering in R and clustered into 300 clusters. Can any one please help me how to plot …