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SPANR result interpretation

Hi,

I have an intronic variant which lies ~70bp upstream of an exon and I have used splicing-based Analysis of Variants (SPANR) to know the impact of a an intronic variant. Unfortunately, I am unable to interpret the results given and not able to find any tutorial regarding the tool. It would be really great if someone can give suggestions on this or suggest any other tools which can be used for the same (other than mutationtaster, HSF, Intsplice,Netgene2). Thank you

spanr intronic variant impact on splicing
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updated by Kevin Blighe Kevin Blighe • written by nkausthu • nkausthu

1 answer

You have not pasted the results here, so, nobody can comment. If you must use SPANR, then consider contacting the author(s) of the program.

I list some other splice predictors here:

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written by Kevin Blighe Kevin Blighe

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