Help when using UCSC's table browser
I'm using the UCSC table browser to define rsID numbers for coordinates/positions that come from a vcf file. Because I'm entering numerous positions at once, I'm using the define regions option, which requires input using BED formatting (0-start/0-based, half-open).
If I'm interested in defining the rsID for CHROM 1, POS 54618134, which of the following would be correct?
[A] chr1 54618133 54618134
[B] chr1 54618134 54618134
[C] chr1 54618134 54618135
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the bed file is a zero based, half open interval. So the right way to write the VCF entry : 1:54618134 is
chr1 54618133 54618134
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