Entering edit mode
5.8 years ago
markd
▴
50
Hi all,
I'm looking for an explanation on the freebayes parameters --pooled-continuous/--pooled-discrete, but can't find it anywhere.
What do they do, and when should I use them?
Did you read
freebayes -h
? It shows some information, though admittedly leave a lot of room for interpretation:However, there is plenty of further discussions / sources of information around, which should get you going:
https://groups.google.com/forum/#!topic/freebayes/KSHsQ-D_ems
https://wiki.metacentrum.cz/wiki/FreeBayes
https://groups.google.com/forum/#!topic/freebayes/sXhAuzV2MqU