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Where can I download a txt file including all human snps rsids, chromosome, and locations?

I tried to download data from useast.ensemble.org, while the downloaded file only contains SNPs in chromosome 1. Is there a better way to do that?

Thank you in advance!

snp r gene

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2 answers

https://ftp.ncbi.nlm.nih.gov/snp/organisms/human_9606/VCF/

Since most browsers are not allowing FTP links, original link has been changed to https. It will work now.

Ensembl's version at this link: https://ftp.ensembl.org/pub/release-92/variation/vcf/homo_sapiens/ They are split according to populations and also for 1000 genomes.

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