Biostar Beta. Not for public use.
fantom5 enhancers GRCh38
0
Entering edit mode
18 months ago
Pin.Bioinf • 240
Malaga

Hello,

I have a dataframe in which the rows are CpGs and the columns are either the CpG relation to Islands, or the name of the samples, and also, a column named: fantom5_enhancers_GRCh38.

This column has a "TRUE" for some CpGs (I understand this means that the CpG is located in an enhancer) and then also in the majority of the rows there is a coordinate such as: chr1:897654-898867. So, does that mean that the CpG is inside an enhancer? Or what should I do with these coordinates? I tried checking if the CpG position is between these coordinates and it isnt most of the times.

Thank you very much

ADD COMMENTlink
0
Entering edit mode

From where did you obtain the data?

ADD REPLYlink

Login before adding your answer.

Similar Posts
Loading Similar Posts
Powered by the version 2.1