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Download CAZy database

Hello Biostars,

Can anyone tell me how to download CAZy database ? http://www.cazy.org/

Or is it even accessible ?

Please help. Thanks in advance. :)

genome gene database cazy
• 9,033 views • link
updated by GenoMax GenoMax • written by anu014 anu014

the latest CAZy sequence list (http://www.cazy.org/) contains over 550,000 JGI protein sequences . Is there an easy way to get these sequences in a fasta file?

• 0 views • link
written by Doomhammer • Doomhammer

There is a "Download Cazy" link at top of the page you linked. Is that not what you need?

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written by GenoMax GenoMax

This link only gives the CAZy sequence list, like this: AA5_2 Bacteria Alloactinosynnema sp. L-07 CRK61066.1 ncbi AA5_2 Eukaryota Alternaria alternata MPI-PUGE-AT-0064 v1.0 485312 jgi AA5_2 Eukaryota Alternaria alternata MPI-PUGE-AT-0064 v1.0 457998 jgi

no attached sequences

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written by Doomhammer • Doomhammer

2 answers

The URL of dbCAN has changed to http://bcb.unl.edu/dbCAN2/download/

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written by yanbin.yin • yanbin.yin

It seems CAZy download point do exist, but it is hidden. You can download a "CAZyDB.07202017.fa" at dbCAN.

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written by h.mon h.mon

I found out that dbCAN cannot be accessed recently,and there is nowhere to download CAZymes database anymore,what should I do to deal with that?

Please help. Thanks in advance. :)

• 0 views • link
written by 724303223 • 724303223

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