sample data required for variant analysis
I need sample data of targeted seq by illumina to identify SNPs that are forensically relevant. where can I find this data?
• 1,516 views
•
link
written
by
bioinfo355 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Possible rRNA contamination in one sample
written by bioinfo355 •
-
TCGA datasets to explore the role of gene target in cancer
written by APJ •
-
Genotype analysis of microarray data
written by fawazfebin
-
Genotype analysis of microarray data
written by fawazfebin
-
What software is designed to do human identity analysis applying CODIS and other panels of forensic…
written by mathisdead •
-
RNA-seq adaptor sequence
written by Arindam Ghosh
-
Number of SNPs by target sequencing
written by MAPK
-
Use PacBio's iso-seq data to look for variant
written by yanweng •
-
Is TCGA PRAD RNA-seq data strand specific?
written by halffedelf •
-
Targeted capture sequencing data
written by MAPK
It's unclear what you are looking for: fastq, bam or vcf? A specific targeted assay, or any will do? A multiplex PCR based assay or using capture probes? How should these SNPs be considered forensically relevant?
If your question fits in one sentence: explain more.
Yes, I want .fastq files and the data should be from illumina platform and it should be targeted assay not wgs. I've to identify identity informative, phenotypic informative and ancestry informative SNPs from the data. These SNPs have importance in forensics for building phenotypic profile of suspects. I am also searching SRA and ENA but have not succeeded yet. if you could provide some help, I shall be very thankful to you.