Getting Smalt to work with bambamc
I have smalt and bambamc installed. Smalt requires bambamc to be able to work with BAM files. Smalt is returning the error:
smalt: error while loading shared libraries: libbambamc.so.0: cannot open shared object file: No such file or directory
I check the bambamc installtion instructions and it tells me where it installs these libraries by default, but I check their locations and they are not there, any ideas?
• 1,694 views
•
link
written
by
imperialcommando117 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Samtools fails with libcrypto error
written by Kaia •
-
augustus installation with conda
written by Shakunthala Natarajan •
-
Convertion of each bedGraph coverage into bigWig coverage not working
written by naloy •
-
bcftools: error while loading shared libraries: libcrypto.so.1.0.0: cannot open shared object file:…
written by Michal Nevo •
-
Tutorial: installing samtools with conda - overcoming two common errors
written by lavinia.gordon •
-
kraken and kraken2: Downloading taxonomy tree data...rsync: error while loading shared libraries: l…
written by joaopedrocoelho18 •
-
error while loading shared libraries: libboost_iostreams.so.1.60.0
written by ashaneev07 •
-
Getting error in running rMATS
written by Reza •
-
ERROR 127: ABYSS-P: error while loading shared libraries: libmpi.so.40: cannot open shared object f…
written by freuv •
-
DELLY Running error(error while loading shared libraries: libboost_iostreams.so.1.53.0: cannot open…
written by lee.jingu0626 •
try to find the lib ? :
find / -type f -name "libbambamc.so.*" 2> /dev/nulland then set the LD_LIBRARY_PATH https://stackoverflow.com/questions/7148036/