You can also find delly singularity image in the same github page above, if you have singularity installed.
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When I running the DELLY, there are error about libbost_iostreams.so.1.53.0
./src/delly: error while loading shared libraries: libboost_iostreams.so.1.53.0: cannot open shared object file: No such file or directory
This is the error message. I check that libboost_iostreams.so.1.53.0 is in boost_1_53_0/stage/lib
So I think DELLY can't find that file or DELLY and boost con't connect each other.
How can I fix it?
You can download and run delly's latest static binary from here:
https://github.com/dellytools/delly/releases/
go to the folder containing the file (~/downloads or custom) and do
chmod +x delly_v0.8.1_linux_x86_64bit
To run it, simply do
./delly_v0.8.1_linux_x86_64bit
You can also find delly singularity image in the same github page above, if you have singularity installed.
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This is a runtime error. It means DELLY cannot find a library it needs. If you globally install BOOST or set your
LD_LIBRARY_PATHthe problem will be resolved.