How to generate heatmap for differentially expressed genes based on the pathway?
How to generate heatmap for differentially expressed genes based on the pathway?
Rows represent the pathways and columns represent the cluster of genes.
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Are you asking about how one can generate a heatmap ? A heatmap is simply a colouring of a numerical matrix so if for each cluster of genes, you can associate a relevant value to each pathway, i.e. get a pathway x cluster numerical matrix, you can plot a heatmap.