Retrieving coverage image
Hi!
I am trying to visualize the coverage of my gene expression using IGV, and, I want to retrieve a high resolution and compact IGV image. Or, with the usage of any other tools. I found that I can use DEGseq however I am not very fluent with R, therefore have not try it yet.
Do you have any suggestions?
Thank you very much.
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this looks incompatible to me.
look at this How To Plot Read Coverage Over Many Different Genomic Regions?
I would upload the data to the UCSC Genome Browser, display the coverage profile as people do for ChIP-seq, and then save the screen as PDF.
See here: https://genome.ucsc.edu/FAQ/FAQcite.html