GATB-minia-pipelne fails at bloocoo step
Hi: I am tryin g to install GATB-minia pipeline and the make went smoothly. When I run the test it fails at the bloocoo step with error
Exception:[Errno 2] No such file or directory
Evrything is as is with the git directory. I didn't change anything. /test folder is intact.
Can anyone help with this.
Thank you
G
1 answer
Glad you were able to solve it. Note also that it is possible to run gatb-minia-pipeline without bloocoo, using the --no-error-correction flag. If you have any other issues, please let us know.
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Rayan Chikhi
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Its working now. I replaced the default bloocoo executable with the one I compile from the source and it is working now. Did the same for the minia too.